People Publications

Honoring a Patient: From Suspicion to Diagnosis. The American journal of medicine 2018.
Rosner S, Insetta ER.

Intimate partner violence victims as mothers: their messages and strategies for communicating with children to break the cycle of violence. 2014.
Insetta ER, Akers AY, Miller E, Yonas MA, Burke JG, Hintz L, Chang JC.

Fear of birth defects is a major barrier to soil-transmitted helminth treatment (STH) for pregnant women in the Philippines. PloS one 2014.
Insetta ER, Soriano AJ, Totañes FI, Macatangay BJ, Belizario VY.

Aortic root and valve proportions: an example of the golden ratio? Monaldi archives for chest disease = Archivio Monaldi per le malattie del torace 2019.
Koshkelashvili N, Jalife Bucay M, Goykhman I, Pressman GS.

Transient Ischemic Dilation Ratio in Regadenoson, Single Isotope Gated Single-photon Emission Computed Tomography Myocardial Perfusion Imaging. World journal of nuclear medicine 2017.
Rubio M, Dias A, Koshkelashvili N, Codolosa JN, Jalife-Bucay M, Rodriguez-Ziccardi M, Amanullah AM.

Electrocardiographic changes in patients = 100 years of age. International journal of cardiology 2016.
Thakar S, Koshkelashvili N, Bucay MJ, Lichstein E, Saqid A, Pressman GS, Figueredo VM.

Azithromycin-Related Cardiovascular Events and Deaths in Severe Septic Patients Azithromycin-Related Cardiovascular Events and Deaths in Severe Septic Patients 2013.
Faverio P, Arango A, Anzueto A, Mortensen E, Waterer G, Wunderink R, Houlihan T, Ezekiel C, Jalife M, Restrepo M.

Idiopathic Bronchiectasis Less Common Than Predicted: Quality Improvement Project Idiopathic Bronchiectasis Less Common Than Predicted: Quality Improvement Project 2013.
Maselli D, Faverio P, Arango A, Fernandez J, Aliberti S, Lonni S, Jalife M, Ezekiel C, Restrepo M.

Rifaximin is Efficacious in the Treatment of Small Intestine Bacterial Overgrowth Rifaximin is Efficacious in the Treatment of Small Intestine Bacterial Overgrowth 2009.
Randall C, Jalife M, Rellas J, Toboada C, Gossen G, Havranek R, Zurita F, Stump D, Fincke C, Ford J, Jamie J..

The Efficacy and Tolerability of Neomycin in the Treatment of Small Intestine Bacterial Overgrowth The Efficacy and Tolerability of Neomycin in the Treatment of Small Intestine Bacterial Overgrowth 2009.
Randall C, Jalife M, Rellas J, Toboada C, Gossen G, Havranek R, Zurita F, Stump D, Fincke C, Ford J, Jamie J.

B cell repertoire diversity and clonal expansion in multiple sclerosis brain lesions. Journal of immunology (Baltimore, Md. : 1950) 1999.
Baranzini SE, Jeong MC, Butunoi C, Murray RS, Bernard CC, Oksenberg JR.

Differential display analysis of murine encephalitogenic mRNA. International immunology 1998.
Jeong MC, Izikson L, Uccelli A, Brocke S, Oksenberg JR.

Limited allelic polymorphism in the human interleukin-3 gene. Molecular and cellular probes 1998.
Jeong MC, Navani A, Oksenberg JR.

Analysis of the T-cell receptor repertoire in human atherosclerosis. Cardiovascular research 1997.
Oksenberg JR, Stavri GT, Jeong MC, Garovoy N, Salisbury JR, Erusalimsky JD.

Characterization of the TCRB chain repertoire in the New World monkey Callithrix jacchus. Journal of immunology (Baltimore, Md. : 1950) 1997.
Uccelli A, Oksenberg JR, Jeong MC, Genain CP, Rombos T, Jaeger EE, Giunti D, Lanchbury JS, Hauser SL.

Local-clonal expansion of infiltrating T lymphocytes in chronic encephalitis of Rasmussen. Journal of immunology (Baltimore, Md. : 1950) 1997.
Li Y, Uccelli A, Laxer KD, Jeong MC, Vinters HV, Tourtellotte WW, Hauser SL, Oksenberg JR.

Language-Specific Challenges and Solutions for Equitable Telemedicine Implementation in the Primary Care Safety Net During COVID-19. Journal of general internal medicine 2023.
Sharma AE, Lisker S, Fields JD, Aulakh V, Figoni K, Jones ME, Arora NB, Sarkar U, Lyles CR.

Hospitalists outside the hospital: Preparing for new settings of care delivery. Journal of hospital medicine 2024.
Judson TJ, Longhurst CA, Horman SF.

Minocycline-induced Hyperpigmentation. Journal of general internal medicine 2016.
Judson T, Mihara K.

Harnessing the Right Combination of Extrinsic and Intrinsic Motivation to Change Physician Behavior. JAMA 2015.
Judson TJ, Volpp KG, Detsky AS.

Attaining Financial Fluency among Physicians: Start with the Students. Journal of health care for the poor and underserved 2015.
Judson TJ, Detsky AS, Charney P.

Medical identity theft: prevention and reconciliation initiatives at Massachusetts General Hospital. Joint Commission journal on quality and patient safety 2014.
Judson T, Haas M, Lagu T.

A piece of my mind. Filling buckets. JAMA 2014.
Press MJ, Judson TJ, Detsky AS.

Miscount incidents: a novel approach to exploring risk factors for unintentionally retained surgical items. Joint Commission journal on quality and patient safety 2013.
Judson TJ, Howell MD, Guglielmi C, Canacari E, Sands K.

Association of Race/Ethnicity With Likeliness of COVID-19 Vaccine Uptake Among Health Workers and the General Population in the San Francisco Bay Area. JAMA internal medicine 2021.
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Encouraging patients to ask questions: how to overcome "white-coat silence". JAMA 2013.
Judson TJ, Detsky AS, Press MJ.

Case Report: Implementation of a Digital Chatbot to Screen Health System Employees during the COVID-19 Pandemic. Journal of the American Medical Informatics Association : JAMIA 2020.
Judson TJ, Odisho AY, Young JJ, Bigazzi O, Steuer D, Gonzales R, Neinstein AB.

Feasibility of long-term patient self-reporting of toxicities from home via the Internet during routine chemotherapy. Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2013.
Judson TJ, Bennett AV, Rogak LJ, Sit L, Barz A, Kris MG, Hudis CA, Scher HI, Sabattini P, Schrag D, Basch E.

Direct binding and regulation of RhoA protein by cyclic GMP-dependent protein kinase Ia. The Journal of biological chemistry 2012.
Kato M, Blanton R, Wang GR, Judson TJ, Abe Y, Myoishi M, Karas RH, Mendelsohn ME.

Impact of patient portal-based self-scheduling of diagnostic imaging studies on health disparities. Journal of the American Medical Informatics Association : JAMIA 2022.
Ganeshan S, Pierce L, Mourad M, Judson TJ, Kohli MD, Odisho AY, Brown W.

Rapid Design and Implementation of an Integrated Patient Self-Triage and Self-Scheduling Tool for COVID-19. Journal of the American Medical Informatics Association : JAMIA 2020.
Judson TJ, Odisho AY, Neinstein AB, Chao J, Williams A, Miller C, Moriarty T, Gleason N, Intinarelli G, Gonzales R.

Association of protective behaviors with SARS-CoV-2 infection: results from a longitudinal cohort study of adults in the San Francisco Bay Area. Annals of epidemiology 2023.
Judson TJ, Zhang S, Lindan CP, Boothroyd D, Grumbach K, Bollyky JB, Sample HA, Huang B, Desai M, Gonzales R, Maldonado Y, Rutherford G, TrackCOVID Consortium.

Building a Targeted Automatic e-Consult (TACo) Program. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2021.
Judson TJ, Mourad M, Wachter RM.

Utilization patterns and efficiency gains from use of a fully EHR-integrated COVID-19 self-triage and self-scheduling tool: a retrospective analysis. Journal of the American Medical Informatics Association : JAMIA 2022.
Judson TJ, Pierce L, Tutman A, Mourad M, Neinstein AB, Shuler G, Gonzales R, Odisho AY.

Agreement Between Telehealth and In-Person Evaluations of Patients with Acute Respiratory Infections. Telemedicine journal and e-health : the official journal of the American Telemedicine Association 2025.
Metlay JP, Gonzales R, Judson TJ, Borczuk P, Dutta S, Liu SW, White BA, Chang Y, Oza S, Parry BA, Tagerman MD, Hayden EM.

COVID-19 symptoms associated with smoking and vaping tobacco and cannabis: A cross-sectional analysis. Preventive medicine reports 2025.
Ndon SU, Liu AW, Judson TJ, Ling PM.

Addressing Inpatient Hyponatremia Through Targeted Automatic E-consults: A Pilot Randomized Trial. Journal of general internal medicine 2024.
Judson TJ, Lo L, Demko JE, Mourad M, Liu KD, Wachter RM, Lopez I, Tummalapalli SL.

Patient Experience and Feedback After Using an Electronic Health Record-Integrated COVID-19 Symptom Checker: Survey Study. JMIR human factors 2022.
Liu AW, Odisho AY, Brown Iii W, Gonzales R, Neinstein AB, Judson TJ.

Reimagining the inpatient palliative care consult: lessons from COVID-19. The American journal of managed care 2021.
Ganeshan S, Humphreys J, Judson T.

Patient Perceptions of e-Visits: Qualitative Study of Older Adults to Inform Health System Implementation. JMIR aging 2023.
Judson TJ, Subash M, Harrison JD, Yeager J, Williams AM, Grouse CK, Byron M.

Reimagining Specialty Consultation in the Digital Age: The Potential Role of Targeted Automatic Electronic Consultations. JAMA 2019.
Wachter RM, Judson TJ, Mourad M.

The Decline of Comprehensiveness and the Path to Restoring It. Journal of general internal medicine 2019.
Judson TJ, Press MJ, Detsky AS.

Race-ethnicity and COVID-19 Vaccination Beliefs and Intentions: A Cross-Sectional Study among the General Population in the San Francisco Bay Area. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2021.
Weng Y, Lu D, Bollyky J, Jain V, Desai M, Lindan C, Boothroyd D, Judson T, Doernberg SB, Holubar M, Sample H, Huang B, Maldonado Y, Rutherford GW, Grumbach K.

Evaluation of technologies approved for supplemental payments in the United States. BMJ (Clinical research ed.) 2019.
Judson TJ, Dhruva SS, Redberg RF.

Design of a population-based longitudinal cohort study of SARS-CoV-2 incidence and prevalence among adults in the San Francisco Bay Area. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2021.
Lindan CP, Desai M, Boothroyd D, Judson T, Bollyky J, Sample H, Weng Y, Cheng Y, Dahlen A, Hedlin H, Grumbach K, Henne J, Garcia S, Gonzales R, Craik CS, Maldonado Y, Rutherford G.

Finding the time: Hourly variation in average daily census on a hospital medicine service. Journal of hospital medicine 2023.
Pierce L, Judson TJ, Mourad M.

Saving without compromising: Teaching trainees to safely provide high value care. Healthcare (Amsterdam, Netherlands) 2018.
Judson TJ, Press MJ, Detsky AS.

Patient Portal Reminders-Easy but Ineffective. JAMA internal medicine 2020.
Judson T, Gonzales R.

Impact of an automated peri-procedural digital health intervention on rates of emergency department visits and readmissions. American journal of surgery 2023.
Liu AW, Pierce L, Ganeshan S, Brown W, Judson T, Divakaran D, Bini S, Odisho AY, Mourad M.

The Troponin Cascade: A Teachable Moment. JAMA internal medicine 2017.
Judson TJ, Beach LY, Soni K.

Accuracy of Patient-Collected Vital Signs. Telemedicine journal and e-health : the official journal of the American Telemedicine Association 2024.
Metlay JP, Gonzales R, Judson TJ, Chang Y, Margolin J, Oza S, Parry BA, Tagerman MD, Hayden E.

Consequences of Influencing Physician Behavior--Reply. JAMA 2016.
Judson TJ, Volpp KG, Detsky AS.

Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19. Science translational medicine 2021.
van der Wijst MGP, Vazquez SE, Hartoularos GC, Bastard P, Grant T, Bueno R, Lee DS, Greenland JR, Sun Y, Perez R, Ogorodnikov A, Ward A, Mann SA, Lynch KL, Yun C, Havlir DV, Chamie G, Marquez C, Greenhouse B, Lionakis MS, Norris PJ, Dumont LJ, Kelly K, Zhang P, Zhang Q, Gervais A, Le Voyer T, Whatley A, Si Y, Byrne A, Combes AJ, Rao AA, Song YS, Fragiadakis GK, Kangelaris K, Calfee CS, Erle DJ, Hendrickson C, Krummel MF, Woodruff PG, Langelier CR, Casanova JL, Derisi JL, Anderson MS, Ye CJ, UCSF COMET consortium.

Collaborative research: The power of multiorganizational affinity groups and adaptive research methods. Journal of hospital medicine 2024.
Linker AS, Astik GJ, Bowling G, Kangelaris KN, Kara A, Keniston A, Kulkarni SA, Sakumoto M, Schwatka N, Westergaard S, Leykum LK, Auerbach A, Burden M.

681. Critical care medicine 2012.
Erika Moseson, Hanjing Zhuo, John Stein, Jeff Chu, Michael Matthay, Kirsten Kangelaris, Kathleen Liu, Carolyn Calfee.

Practical Applications of Rapid Qualitative Analysis for Operations, Quality Improvement, and Research in Dynamically Changing Hospital Environments. Joint Commission journal on quality and patient safety 2022.
Keniston A, McBeth L, Astik G, Auerbach A, Busch J, Kangelaris KN, Kulkarni SA, Linker AS, Sakumoto M, Leykum L, Burden M.

Therapeutic Anticoagulation with Heparin in Critically Ill Patients with Covid-19. The New England journal of medicine 2021.
REMAP-CAP Investigators , ACTIV-4a Investigators , ATTACC Investigators , Goligher EC, Bradbury CA, McVerry BJ, Lawler PR, Berger JS, Gong MN, Carrier M, Reynolds HR, Kumar A, Turgeon AF, Kornblith LZ, Kahn SR, Marshall JC, Kim KS, Houston BL, Derde LPG, Cushman M, Tritschler T, Angus DC, Godoy LC, McQuilten Z, Kirwan BA, Farkouh ME, Brooks MM, Lewis RJ, Berry LR, Lorenzi E, Gordon AC, Ahuja T, Al-Beidh F, Annane D, Arabi YM, Aryal D, Baumann Kreuziger L, Beane A, Bhimani Z, Bihari S, Billett HH, Bond L, Bonten M, Brunkhorst F, Buxton M, Buzgau A, Castellucci LA, Chekuri S, Chen JT, Cheng AC, Chkhikvadze T, Coiffard B, Contreras A, Costantini TW, de Brouwer S, Detry MA, Duggal A, Džavík V, Effron MB, Eng HF, Escobedo J, Estcourt LJ, Everett BM, Fergusson DA, Fitzgerald M, Fowler RA, Froess JD, Fu Z, Galanaud JP, Galen BT, Gandotra S, Girard TD, Goodman AL, Goossens H, Green C, Greenstein YY, Gross PL, Haniffa R, Hegde SM, Hendrickson CM, Higgins AM, Hindenburg AA, Hope AA, Horowitz JM, Horvat CM, Huang DT, Hudock K, Hunt BJ, Husain M, Hyzy RC, Jacobson JR, Jayakumar D, Keller NM, Khan A, Kim Y, Kindzelski A, King AJ, Knudson MM, Kornblith AE, Kutcher ME, Laffan MA, Lamontagne F, Le Gal G, Leeper CM, Leifer ES, Lim G, Gallego Lima F, Linstrum K, Litton E, Lopez-Sendon J, Lother SA, Marten N, Saud Marinez A, Martinez M, Mateos Garcia E, Mavromichalis S, McAuley DF, McDonald EG, McGlothlin A, McGuinness SP, Middeldorp S, Montgomery SK, Mouncey PR, Murthy S, Nair GB, Nair R, Nichol AD, Nicolau JC, Nunez-Garcia B, Park JJ, Park PK, Parke RL, Parker JC, Parnia S, Paul JD, Pompilio M, Quigley JG, Rosenson RS, Rost NS, Rowan K, Santos FO, Santos M, Santos MO, Satterwhite L, Saunders CT, Schreiber J, Schutgens REG, Seymour CW, Siegal DM, Silva DG, Singhal AB, Slutsky AS, Solvason D, Stanworth SJ, Turner AM, van Bentum-Puijk W, van de Veerdonk FL, van Diepen S, Vazquez-Grande G, Wahid L, Wareham V, Widmer RJ, Wilson JG, Yuriditsky E, Zhong Y, Berry SM, McArthur CJ, Neal MD, Hochman JS, Webb SA, Zarychanski R.

Longitudinal multi-omic signatures of ARDS and sepsis inflammatory phenotypes identify key pathways associated with mortality. medRxiv : the preprint server for health sciences 2025.
Alipanah-Lechner N, Neyton L, Sinha P, Leroux C, Bardillon K, Carrillo SA, Chak S, Chao O, Hariharan T, Henrickson C, Kangelaris K, Langelier CR, Lee D, Lin C, Liu K, Magee L, Ringor A, Sarma A, Schmiege E, Spottiswoode N, Sullivan K, Weingart MF, Willmore A, Zhuo H, Rogers AJ, Stringer KA, Matthay MA, Calfee CS.

The association between a Darc gene polymorphism and clinical outcomes in African American patients with acute lung injury. Chest 2011.
Kangelaris KN, Sapru A, Calfee CS, Liu KD, Pawlikowska L, Witte JS, Vittinghoff E, Zhuo H, Auerbach AD, Ziv E, Matthay MA, National Heart, Lung, and Blood Institute ARDS Network.

Cigarette Smoke Exposure and ARDS in Sepsis: Epidemiology, Clinical Features, and Biologic Markers. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2022.
Moazed F, Hendrickson C, Jauregui A, Gotts J, Conroy A, Delucchi K, Zhuo H, Arambulo M, Vessel K, Ke S, Deiss T, Ni A, Leligdowicz A, Abbott J, Cohen MJ, Sinha P, Gomez A, Kangelaris K, Kornblith L, Matthay M, Benowitz N, Liu K, Calfee CS.

Building a thriving academic hospitalist workforce: A rapid qualitative analysis identifying key areas of focus in the field. Journal of hospital medicine 2023.
Kulkarni SA, Keniston A, Linker AS, Astik GJ, Kangelaris KN, Leykum LK, Sakumoto M, Auerbach A, Burden M.

Publisher Correction: Global absence and targeting of protective immune states in severe COVID-19. Nature 2021.
Combes AJ, Courau T, Kuhn NF, Hu KH, Ray A, Chen WS, Chew NW, Cleary SJ, Kushnoor D, Reeder GC, Shen A, Tsui J, Hiam-Galvez KJ, Muñoz-Sandoval P, Zhu WS, Lee DS, Sun Y, You R, Magnen M, Rodriguez L, Im KW, Serwas NK, Leligdowicz A, Zamecnik CR, Loudermilk RP, Wilson MR, Ye CJ, Fragiadakis GK, Looney MR, Chan V, Ward A, Carrillo S, UCSF COMET Consortium , Matthay M, Erle DJ, Woodruff PG, Langelier C, Kangelaris K, Hendrickson CM, Calfee C, Rao AA, Krummel MF.

Heterogeneity in association of myocardial injury and mortality in sepsis or acute respiratory distress syndrome by subphenotype: a retrospective study. Critical care (London, England) 2025.
Sanchez PA, Obeidalla S, Kerchberger VE, Moore AR, Maddali MV, Kangelaris KN, Hendrickson CM, Evrard B, Liu KD, Bastarache JA, Matthay MA, Rogers AJ, Calfee CS.

FGF-23 and PTH levels in patients with acute kidney injury: A cross-sectional case series study. Annals of intensive care 2011.
Zhang M, Hsu R, Hsu CY, Kordesch K, Nicasio E, Cortez A, McAlpine I, Brady S, Zhuo H, Kangelaris KN, Stein J, Calfee CS, Liu KD.

Functional Transcriptomic Studies of Immune Responses and Endotoxin Tolerance In early Human Sepsis. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2022.
Leligdowicz A, Kamm J, Kalantar K, Jauregui A, Vessel K, Caldera S, Serpa PH, Abbott J, Fang X, Tian X, Prakash A, Kangelaris KN, Liu KD, Calfee CS, Langelier C, Matthay MA.

Implementation and evaluation of a "works-in-progress" session to promote scholarship in an academic hospitalist group. Journal of hospital medicine 2016.
Patel H, Fang MC, Harrison JD, Auerbach A, Kangelaris KN.

Plasma Metabolites in Early Sepsis Identify Distinct Clusters Defined by Plasma Lipids. Critical care explorations 2021.
Rogers AJ, Leligdowicz A, Contrepois K, Jauregui A, Vessel K, Deiss TJ, Belzer A, Liu T, Lippi M, Ke S, Ross E, Zhou H, Hendrickson C, Gomez A, Sinha P, Kangelaris KN, Liu KD, Calfee CS, Matthay MA.

Host-Microbe Multiomic Profiling Predicts Mortality in Sepsis. American journal of respiratory and critical care medicine 2025.
Spottiswoode N, Neyton LP, Mick E, Kalantar KL, Hao S, Lydon EC, Narendra R, Serpa PH, Caldera S, Gomez A, Hendrickson C, Kangelaris K, Liu KD, Sinha P, DeRisi JL, Matthay MA, Calfee CS, Langelier CR.

Genetic Testing Before Anticoagulation? A Systematic Review of Pharmacogenetic Dosing of Warfarin. Journal of general internal medicine 2009.
Kirsten Neudoerffer Kangelaris, Stephen Bent, Robert L. Nussbaum, David A. Garcia, Jeffrey A. Tice.

Validation and utility of ARDS subphenotypes identified by machine-learning models using clinical data: an observational, multicohort, retrospective analysis. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2022.
Maddali MV, Churpek M, Pham T, Rezoagli E, Zhuo H, Zhao W, He J, Delucchi KL, Wang C, Wickersham N, McNeil JB, Jauregui A, Ke S, Vessel K, Gomez A, Hendrickson CM, Kangelaris KN, Sarma A, Leligdowicz A, Liu KD, Matthay MA, Ware LB, Laffey JG, Bellani G, Calfee CS, Sinha P, LUNG SAFE Investigators and the ESICM Trials Group.

Mass cytometry reveals a conserved immune trajectory of recovery in hospitalized COVID-19 patients. Immunity 2022.
Burnett CE, Okholm TLH, Tenvooren I, Marquez DM, Tamaki S, Munoz Sandoval P, Willmore A, UCSF COMET Consortium, Hendrickson CM, Kangelaris KN, Langelier CR, Krummel MF, Woodruff PG, Calfee CS, Erle DJ, Ansel KM, Spitzer MH.

Genetic testing before anticoagulation? A systematic review of pharmacogenetic dosing of warfarin. Journal of general internal medicine 2009.
Kangelaris KN, Bent S, Nussbaum RL, Garcia DA, Tice JA.

Clinical implications of founder and recurrent CDH1 mutations in hereditary diffuse gastric cancer. JAMA 2007.
Kangelaris KN, Gruber SB.

Exploring the Impact of COVID-19 on Women Hospitalists: A Mixed-Gender Qualitative Analysis. Journal of general internal medicine 2023.
Busch JI, Keniston A, Astik GJ, Auerbach A, Kangelaris KN, Kulkarni SA, Leykum LK, Linker AS, Nieto K, Pierce RG, Sakumoto M, Burden M.

Big brother or big opportunity? Utilization of EHR use metadata in the inpatient setting: A mixed methods study at 16 organizations. Journal of hospital medicine 2024.
Burden M, Keniston A, McBeth L, Astik G, Kangelaris KN, Kochar A, Knees M, Segon A, Westergaard S, Yu A, Sakumoto M, Chadha R.

Perspectives on increasing corporate ownership and unionization in hospital medicine: An exploratory mixed methods study. Journal of hospital medicine 2026.
Burden M, Keniston A, Astik G, Callister C, Frederickson T, Hendricks M, Kangelaris KN, Maw A, Murray-Bainer S, Peterson RJ, Leykum LK, Workforce Emerging Trends Work Group.

Adaptability on Shifting Ground: a Rapid Qualitative Assessment of Multi-institutional Inpatient Surge Planning and Workforce Deployment During the COVID-19 Pandemic. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2022.
Keniston A, Sakumoto M, Astik GJ, Auerbach A, Eid SM, Kangelaris KN, Kulkarni SA, Lee T, Leykum LK, Linker AS, Worster DT, Burden M.

A conserved immune trajectory of recovery in hospitalized COVID-19 patients. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2022.
Burnett CE, Hauge Okholm TL, Tenvooren I, Marquez DM, Tamaki S, Sandoval PM, UCSF COMET Consortium, Calfee CS, Hendrickson CM, Kangelaris KN, Langelier CR, Krummel MF, Woodruff PG, Erle DJ, Ansel KM, Spitzer MH.

A multi-institutional multi-methods analysis of jeopardy systems in academic hospital medicine. Journal of hospital medicine 2025.
Kangelaris KN, Keniston A, Auerbach AD, Bowling G, Burden M, Kulkarni SA, Leykum LK, Linker AS, Sakumoto M, Schnipper J, Astik G.

Latent class analysis-derived subphenotypes are generalisable to observational cohorts of acute respiratory distress syndrome: a prospective study. Thorax 2021.
Sinha P, Delucchi KL, Chen Y, Zhuo H, Abbott J, Wang C, Wickersham N, McNeil JB, Jauregui A, Ke S, Vessel K, Gomez A, Hendrickson CM, Kangelaris KN, Sarma A, Leligdowicz A, Liu KD, Matthay MA, Ware LB, Calfee CS.

Efficacy and safety of two neutralising monoclonal antibody therapies, sotrovimab and BRII-196 plus BRII-198, for adults hospitalised with COVID-19 (TICO): a randomised controlled trial. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2021.
ACTIV-3/Therapeutics for Inpatients with COVID-19 (TICO) Study Group.

Elevated Hemoglobin A1c and the Risk of Developing Acute Respiratory Distress Syndrome in Two Cohort Studies. CHEST Critical Care 2024.
Avery M. Bogart, Christine R. Lopez, Sarah N. Obeidalla, Chunxue Wang, Andrew Willmore, Alejandra Jauregui, Kirsten N. Kangelaris, Carolyn Hendrickson, Antonio Gomez, Kathleen D. Liu, Michael A. Matthay, Ciara M. Shaver, Julie A. Bastarache, Carolyn S. Calfee, V. Eric Kerchberger, Lorraine B. Ware.

Variation in Initial U.S. Hospital Responses to the Coronavirus Disease 2019 Pandemic. Critical care medicine 2021.
Mathews KS, Seitz KP, Vranas KC, Duggal A, Valley TS, Zhao B, Gundel S, Harhay MO, Chang SY, Hough CL, National Heart, Lung, and Blood Institute Prevention and Early Treatment of Acute Lung Injury (PETAL.

Responses to a Neutralizing Monoclonal Antibody for Hospitalized Patients With COVID-19 According to Baseline Antibody and Antigen Levels : A Randomized Controlled Trial. 2015 Year Book of Pediatrics. Ed. Cabana MD. (Elsevier; Philadelphia, PA) 2021.
ACTIV-3/TICO Bamlanivimab Study Group, Lundgren JD, Grund B, Barkauskas CE, Holland TL, Gottlieb RL, Sandkovsky U, Brown SM, Knowlton KU, Self WH, Files DC, Jain MK, Benfield T, Bowdish ME, Leshnower BG, Baker JV, Jensen JU, Gardner EM, Ginde AA, Harris ES, Johansen IS, Markowitz N, Matthay MA, Østergaard L, Chang CC, Goodman AL, Chang W, Dewar RL, Gerry NP, Higgs ES, Highbarger H, Murray DD, Murray TA, Natarajan V, Paredes R, Parmar MKB, Phillips AN, Reilly C, Rupert AW, Sharma S, Shaw-Saliba K, Sherman BT, Teitelbaum M, Wentworth D, Cao H, Klekotka P, Babiker AG, Davey VJ, Gelijns AC, Kan VL, Polizzotto MN, Thompson BT, Lane HC, Neaton JD.

Evaluation of a novel metric for personalized opioid prescribing after hospitalization. PloS one 2020.
Iverson NR, Lau CY, Abe-Jones Y, Fang MC, Kangelaris KN, Prasad P, Shah SJ, Najafi N.

The Association between Limited English Proficiency and Sepsis Mortality. Journal of hospital medicine 2019.
Zachary G Jacobs, Priya A Prasad, Margaret C Fang, Yumiko Abe-Jones, Kirsten N Kangelaris.

Impaired immune signaling and changes in the lung microbiome precede secondary bacterial pneumonia in COVID-19. Research square 2021.
Tsitsiklis A, Zha B, Byrne A, DeVoe C, Levan S, Rackaityte E, Sunshine S, Mick E, Ghale R, Jauregui A, Neff N, Sarma A, Serpa P, Deiss T, Kistler A, Carrillo S, Ansel KM, Leligdowicz A, Christenson S, Jones N, Wu B, Darmanis S, Matthay M, Lynch S, DeRisi J, Consortium C, Hendrickson C, Kangelaris K, Krummel M, Woodruff P, Erle D, Rosenberg O, Calfee C, Langelier C.

A Neutralizing Monoclonal Antibody for Hospitalized Patients with Covid-19. The New England journal of medicine 2020.
ACTIV-3/TICO LY-CoV555 Study Group , Lundgren JD, Grund B, Barkauskas CE, Holland TL, Gottlieb RL, Sandkovsky U, Brown SM, Knowlton KU, Self WH, Files DC, Jain MK, Benfield T, Bowdish ME, Leshnower BG, Baker JV, Jensen JU, Gardner EM, Ginde AA, Harris ES, Johansen IS, Markowitz N, Matthay MA, Østergaard L, Chang CC, Davey VJ, Goodman A, Higgs ES, Murray DD, Murray TA, Paredes R, Parmar MKB, Phillips AN, Reilly C, Sharma S, Dewar RL, Teitelbaum M, Wentworth D, Cao H, Klekotka P, Babiker AG, Gelijns AC, Kan VL, Polizzotto MN, Thompson BT, Lane HC, Neaton JD.

Timing of antibiotic treatment identifies distinct clinical presentations among patients presenting with suspected septic shock. Journal of the American College of Emergency Physicians open 2024.
Prasad PA, Esmaili AM, Oreper S, Beagle AJ, Hubbard C, Raffel KE, Abe-Jones Y, Fang MC, Liu KD, Matthay MA, Kangelaris KN.

Using best subset regression to identify clinical characteristics and biomarkers associated with sepsis-associated acute kidney injury. American journal of physiology. Renal physiology 2020.
Kwong YD, Mehta KM, Miaskowski C, Zhuo H, Yee K, Jauregui A, Ke S, Deiss T, Abbott J, Kangelaris KN, Sinha P, Hendrickson C, Gomez A, Leligdowicz A, Matthay MA, Calfee CS, Liu KD.

Global absence and targeting of protective immune states in severe COVID-19. 2021.
Combes AJ, Courau T, Kuhn NF, Hu KH, Ray A, Chen WS, Chew NW, Cleary SJ, Kushnoor D, Reeder GC, Shen A, Tsui J, Hiam-Galvez KJ, Muñoz-Sandoval P, Zhu WS, Lee DS, Sun Y, You R, Magnen M, Rodriguez L, Im KW, Serwas NK, Leligdowicz A, Zamecnik CR, Loudermilk RP, Wilson MR, Ye CJ, Fragiadakis GK, Looney MR, Chan V, Ward A, Carrillo S, UCSF COMET Consortium , Matthay M, Erle DJ, Woodruff PG, Langelier C, Kangelaris K, Hendrickson CM, Calfee C, Rao AA, Krummel MF.

Identifying molecular phenotypes in sepsis: an analysis of two prospective observational cohorts and secondary analysis of two randomised controlled trials. The Lancet. Respiratory medicine 2023.
Sinha P, Kerchberger VE, Willmore A, Chambers J, Zhuo H, Abbott J, Jones C, Wickersham N, Wu N, Neyton L, Langelier CR, Mick E, He J, Jauregui A, Churpek MM, Gomez AD, Hendrickson CM, Kangelaris KN, Sarma A, Leligdowicz A, Delucchi KL, Liu KD, Russell JA, Matthay MA, Walley KR, Ware LB, Calfee CS.

Clinician Recognition of the Acute Respiratory Distress Syndrome: Risk Factors for Under-Recognition and Trends Over Time. Critical care medicine 2020.
Schwede M, Lee RY, Zhuo H, Kangelaris KN, Jauregui A, Vessel K, Belzer A, Deiss T, Matthay MA, Liu KD, Calfee CS.

COVID-19 ARDS is characterized by a dysregulated host response that differs from cytokine storm and is modified by dexamethasone. 2021.
Sarma A, Christenson S, Mick E, Deiss T, DeVoe C, Pisco A, Ghale R, Jauregui A, Byrne A, Moazed F, Spottiswoode N, Sinha P, Zha B, Neff N, Tan M, Serpa PH, Ansel KM, Wilson J, Leligdowicz A, Seigel E, Sirota M, DeRisi J, Matthay M, Consortium C, Hendrickson C, Kangelaris K, Krummel M, Woodruff P, Erle D, Calfee C, Langelier C.

Acute respiratory distress syndrome-attributable mortality in critically ill patients with sepsis. Intensive care medicine 2020.
Auriemma CL, Zhuo H, Delucchi K, Deiss T, Liu T, Jauregui A, Ke S, Vessel K, Lippi M, Seeley E, Kangelaris KN, Gomez A, Hendrickson C, Liu KD, Matthay MA, Ware LB, Calfee CS.

A Neutrophil Subset Defined by Intracellular Olfactomedin 4 is Associated with Mortality in Sepsis. American journal of physiology. Lung cellular and molecular physiology 2020.
Kangelaris KN, Clemens R, Fang X, Jauregui A, Liu T, Vessel K, Deiss T, Sinha P, Leligdowicz A, Liu KD, Zhuo H, Alder MN, Wong HR, Calfee CS, Lowell CA, Matthay MA.

Neighborhood Health Measured by the Healthy Places Index (HPI), but Not by the Area Deprivation Index (ADI), Is Associated With Mortality for Critically Ill Sepsis Patients in the San Francisco Bay Area. American journal of respiratory and critical care medicine 2025.
K.M. Sullivan, A.M. Dedent, A. Willmore, K.N. Kangelaris, C.M. Hendrickson, C. Lin, C.S. Calfee, N. Thakur, M.A. Matthay.

Longitudinal multiomic signatures of ARDS and sepsis inflammatory phenotypes identify pathways associated with mortality. The Journal of clinical investigation 2025.
Alipanah-Lechner N, Neyton L, Sinha P, Leroux C, Bardillon K, Carrillo SA, Chak S, Chao O, Hariharan T, Hendrickson C, Kangelaris K, Langelier CR, Lee D, Lin C, Liu K, Magee L, Ringor A, Sarma A, Schmiege E, Spottiswoode N, Sullivan K, Weingart MF, Willmore A, Zhuo H, Rogers AJ, Stringer KA, Matthay MA, Calfee CS.

Peripheral blood leukocyte telomere length is associated with survival of sepsis patients. The European respiratory journal 2020.
Liu S, Wang C, Green G, Zhuo H, Liu KD, Kangelaris KN, Gomez A, Jauregui A, Vessel K, Ke S, Hendrickson C, Matthay MA, Calfee CS, Ware LB, Wolters PJ.

Effect of Hydroxychloroquine on Clinical Status at 14 Days in Hospitalized Patients With COVID-19: A Randomized Clinical Trial. JAMA 2020.
Self WH, Semler MW, Leither LM, Casey JD, Angus DC, Brower RG, Chang SY, Collins SP, Eppensteiner JC, Filbin MR, Files DC, Gibbs KW, Ginde AA, Gong MN, Harrell FE, Hayden DL, Hough CL, Johnson NJ, Khan A, Lindsell CJ, Matthay MA, Moss M, Park PK, Rice TW, Robinson BRH, Schoenfeld DA, Shapiro NI, Steingrub JS, Ulysse CA, Weissman A, Yealy DM, Thompson BT, Brown SM.